Hoo boy, time for Hyper to play a lot of catch-up...
But Omega is Dr. Vile's slave? Vile succeeded where Wily failed?
More like both have their own methods, parallel branches along the same tree. Recall, if you will, that even without Dark Elf (one of many Sigma Virus derivatives), Omega still resonates the same energy signature as Dark Elf.
I'm not convinced that Wily is "failing" with Zero. He aptly demonstrated in X6 (and is further implied in X4) that if he wanted to capture Zero, nothing's stopping him. For some reason or another, it seems to me that he wants to take a more passive role.
After all, we just established that losing the virus after awakening returns him to hunter state.
In what way does getting one's ass kicked by X constitute losing the virus? We know from Alia that "killed" qualifies under that, but not so with merely "beaten".
That scene always felt out of character to me - remorse isn't like Wily, and neither is gratitude - so maybe it's just that the idea of the whole Roboenza episode being a test appeals to me..
Personally, I'm still wide open to holding the Quint future as valid (Wily sincerely reforms, then re-evaluates his life after encountering his past evil self and betraying Rock). If such were the case, it would only be natural for Classic Wily to be a bit more compassionate than X-series Wily. I will admit that 10's ending was unexpected, though.
The question of what Wily is trying to accomplish in 21XX seems to be everlasting. While I believe he's going less the world domination route and focusing more on his personal rivalry, it is simply my own personal speculation, and none of the recent info seems to impact it too much.
Sigma finding Zero's evil form incomplete is a poor translation thing.
Man, you really can't trust X5's translations, huh? Now you have me wondering how Zero responds to the Light capsules.
I can't be stressed enough that the change to good wasn't planned by Wily.
I'm not convinced of that. It's possible that the Hunter stage was intentional even if Wily's ultimate end for Zero turns out to be evil, as a "learning process" to aid Zero's growth. Zero, like X, learns from experience in battle; what better way to ensure X does not challenge Zero prematurely than for Zero to gain experience on X's side? Note that Learning System attacks have appeared as part of Omega's arsenal, as well as seemingly being the base from which several of Awakened Zero's attacks are derived.
I like how you tried to explain such specifics as "during missions." I think you might be on to something with the damage to Zero's systems. If a defensive breach not only can promote infection, but further damage can actually promote the virus leaving his systems, the importance of Sigma's knockout punch can be highlighted in relation to Zero's reversion to hunter state in X2 and X5.
Might also go a ways to explaining how nobody at Hunter Base noticed. The Hunters have been aware of the virus since X3 and have been researching it since X5 at the absolute latest. While it's true that the virus can often defy their analysis, especially with Zero, one does have to wonder how nothing even remotely suspicious (sans antivirus reactions) ever turned up while Zero was "chilling" at home. Even if Zero himself showed no reaction wouldn't they notice if viral infections were following the same trail as him? One only continues to raise eyebrows at that with X8's talks of the Hunters testing New Gen viral immunity.
Basically, if Zero is only spreading the virus in areas that are already combat zones to begin with, it would explain a lot. Would fit nicely with my above question about him reverting at defeat, as well. It's still conjecture, but it does fit nicely.
But then we arrive at the same question, to what end? If the Hunter personna was established as permanent, others should be able to be written as permanent as well. If it is indeed the ideal state for Zero to learn new abilities, then that would lend more credit to such a fall-back upon defeat as being intentional.
If they had just let those first mavericks be the results of various chip errors or *gasp* free will itself, there wouldn't be a problem here... but alas.
I personally would really like to know what kind of chip error-to-virus ratio we're dealing with in X1. In playing MHX and re-examining The Day Of Sigma, the emphasis I'm seeing on X's worrying is that first-gen Reploids, in general, tend to be more ruthless than X is (X's compassion is always his defining trait, but X1 'roids strike me as less "human" in personality than later characters). When you remove sympathy for others, it's not a small leap to think of disposing the weak to advance the superior race, or "sacrifice for evolution" is perfectly acceptable.
But having the majority of Irregulars caused by defected thought circuits removes the special aspect from VAVA.
I think the MHX statement of "someone who can go Maverick of their own accord" references Sigma's position as a leader as much as it does viral manipulation. Playing through MHX, I took notice that virtually nobody seems to actually believe in Sigma's cause. The bosses are mostly following Sigma for the sake of following their leader (Spark Mandrill, Armored Armadillo), occasionally reaping some personal benefits (Chill Penguin, Launch Octopus). Flame Mammoth is basically Vile on a leash. Then there's Storm Eagle and Sting Chameleon who are seemingly being forced. Boomer Kuwanger is about the only one who actually thinks about what's going on, and he's more centered on X's combat abilities than anything else.
Vile is unique in that he, like Sigma, was willing to challenge the status of the world. The others who had gone Maverick did so only by Sigma's manipulation, whether the virus was or was not part of that manipulation is irrelevant. One way or the other they would never have rebelled without Sigma. With Vile, however, Sigma merely turned him loose and let him do as he pleased.
Probably. They didn't supply a picture showing exactly what they meant in the book. Zero's insides don't look quite the same way when shown in X5, but he still seems to have a upper chest gem and a head gem underneath, so I imagine the vague idea holds true. That page is the only place that ever talks about them, so far as I know.
I feel compelled to point out that X4's designs are identical to those of the armor kit figures, which are the same between X and Zero (barring faces and chest gem colors). In X5 they probably felt the need to offer something a little more unique.